FastQCFastQC Report
Mon 25 Mar 2013
13.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 13.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 28905255
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1789943 6.192448397358889 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1292226 4.470557343292768 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1022617 3.5378238316873527 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 901032 3.11719097444392 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 785764 2.718412274861439 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 456803 1.5803458575265987 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 426647 1.4760188069608797 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 399065 1.3805967115668067 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 310126 1.0729052554630638 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 305857 1.0581363146597391 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 258469 0.8941938066278952 RNA PCR Primer, Index 1 (100% over 25bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 219740 0.7602077892064956 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 214262 0.7412562179437614 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 201506 0.6971258340395198 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 187607 0.649041151859757 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 162678 0.5627973183422875 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 155309 0.5373036840532976 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 146221 0.5058630342475788 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 141787 0.49052326298453347 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 141399 0.48918094650955335 RNA PCR Primer, Index 1 (100% over 28bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 122648 0.42431038923545217 RNA PCR Primer, Index 1 (100% over 33bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 122422 0.4235285244845617 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 113183 0.3915654783187348 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 102869 0.35588338521836255 RNA PCR Primer, Index 1 (100% over 25bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 102090 0.3531883735327711 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 94404 0.3265980528454082 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 93660 0.3240241264088485 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 89378 0.30921021108445507 No Hit
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 87958 0.3042976095523115 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 86030 0.2976275421199363 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 83569 0.2891135193237354 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 80690 0.27915339269624156 No Hit
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 80188 0.2774166842672725 RNA PCR Primer, Index 1 (100% over 24bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 79955 0.2766106024665757 RNA PCR Primer, Index 1 (100% over 27bp)
ACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 77781 0.2690894787124348 RNA PCR Primer, Index 1 (100% over 31bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 77416 0.2678267325439613 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 76479 0.2645851074484553 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 74639 0.2582194829279313 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 74435 0.2575137289050036 RNA PCR Primer, Index 1 (100% over 27bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTG 73858 0.25551755208525234 RNA PCR Primer, Index 2 (97% over 35bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 70831 0.24504540783328155 RNA PCR Primer, Index 1 (100% over 26bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 70472 0.2438034191360706 RNA PCR Primer, Index 1 (100% over 32bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 69879 0.24175188905961909 RNA PCR Primer, Index 1 (100% over 25bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 65324 0.22599350879277832 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 61576 0.2130270084107544 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 60752 0.21017631569069362 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 54157 0.18736039519457623 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 53371 0.18464116645917844 RNA PCR Primer, Index 1 (100% over 30bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 51029 0.17653883350968536 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 49817 0.1723458243146445 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 49684 0.171885700368324 RNA PCR Primer, Index 1 (100% over 31bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 47722 0.1650980072654609 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 47388 0.16394250803184404 RNA PCR Primer, Index 3 (100% over 34bp)
GTAGTCGTGGCCGAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 47202 0.1632990264227041 RNA PCR Primer, Index 3 (100% over 34bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 47018 0.1626624639706517 RNA PCR Primer, Index 1 (100% over 28bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 46103 0.1594969496031085 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 45839 0.15858362086755506 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 45221 0.15644560132750948 RNA PCR Primer, Index 1 (100% over 25bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTGA 44454 0.1537921045844432 RNA PCR Primer, Index 2 (97% over 36bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 44380 0.15353609577220476 No Hit
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 44285 0.15320743581054727 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 40192 0.13904738083092505 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 40191 0.13904392125238127 No Hit
TGAGGTAGTAGGTTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 38955 0.13476788217229013 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 38442 0.13299311837933966 RNA PCR Primer, Index 1 (100% over 26bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 37723 0.13050568140637403 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 37260 0.12890389654061174 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 37008 0.12803208274758343 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGTGGAATTCTCGGGTG 36419 0.125994390985307 No Hit
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 35526 0.12290498734572658 RNA PCR Primer, Index 1 (100% over 26bp)
CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC 34833 0.12050749941489877 RNA PCR Primer, Index 1 (100% over 27bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 34803 0.12040371205858588 RNA PCR Primer, Index 1 (100% over 28bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 34545 0.11951114079429502 RNA PCR Primer, Index 1 (100% over 30bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 34497 0.11934508102419439 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 33820 0.11700294635006679 RNA PCR Primer, Index 1 (100% over 26bp)
ACCGGGTGCTGTAGGCTTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 33477 0.11581631090955607 RNA PCR Primer, Index 1 (100% over 30bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 33473 0.11580247259538103 RNA PCR Primer, Index 1 (100% over 27bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 33052 0.11434599002845677 No Hit
GCGTTCGCGCTTTCCCCTGTGGAATTCTCGGGTGCCAAGGAACTCCAGT 32595 0.11276496263395704 RNA PCR Primer, Index 1 (100% over 30bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 31961 0.11057158983721126 RNA PCR Primer, Index 1 (100% over 29bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 31607 0.10934689903271913 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGATGGAATTCTCGGGTGCCAAGGAACTCC 29112 0.1007152505660303 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 28909 0.10001295612164639 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 29317125 28.69601 340.35205 26
TTCTC 29399605 28.464409 335.78662 28
ATTCT 29237400 26.754015 318.15686 27
GCCAA 26702825 25.747507 333.49643 37
CCAAG 26418280 25.47314 333.60727 38
TGCCA 28243235 25.459064 311.69495 36
TCTCG 29191520 24.599981 292.1237 29
AACTC 21806475 24.157167 382.47205 44
GAATT 29302220 22.05757 262.26706 25
GAACT 25690080 21.886837 294.2833 43
CTCGG 29112315 21.353657 253.98589 30
ACTCC 17999180 21.097145 404.68112 45
GTGCC 27658155 20.28704 253.82524 35
CAAGG 26037215 19.307652 256.53018 39
GGAAT 29374150 19.245972 228.12756 24
TGGAA 29045305 19.030512 227.94334 23
GGAAC 24795415 18.386806 256.30933 42
AAGGA 25819935 18.095877 242.36125 40
AGGAA 25278570 17.716461 242.4407 41
CGGGT 28977875 16.346283 195.04918 32
TCGGG 28884615 16.293674 195.31194 31
GGTGC 28585750 16.125086 195.34349 34
GGGTG 28964420 12.565342 150.21635 33
CTCCA 10413940 12.206358 126.78551 45
TTGGA 13084405 8.014539 136.79478 22
TCCAG 8574655 7.72938 66.17344 45
CCAGT 7529740 6.787471 44.90786 7
CAGTC 5636155 5.080552 36.41972 45
ACTGA 5844485 4.979248 148.21912 12
AGTCA 5102865 4.34742 32.718616 45
TCAGA 5101525 4.346278 153.28386 8
GACTG 6171145 4.278098 121.060326 11
CTGGA 6049275 4.1936126 38.019 23
TATCA 4216050 4.126729 170.01808 6
CAGAC 4241070 4.0893416 167.72868 9
TTATC 4450335 4.0723295 158.92068 5
ATGGA 6195075 4.059019 54.200336 22
TGATG 6116080 3.7462587 106.58481 14
AGACT 4326250 3.685778 148.38098 10
CTGAT 4577880 3.6461287 138.63672 13
ATCAG 4276085 3.6430395 148.40782 7
CTTAT 3963265 3.6266303 158.72154 4
AGCTT 4314985 3.4367416 138.27705 2
GTGGA 6247235 3.3306565 22.182524 20
GTAGT 5421865 3.321034 103.93565 5
TAGCT 4147625 3.303445 138.27711 1
CTTGG 5061045 3.280011 31.18914 23
TGTTG 5635630 3.227135 99.063614 17
GTCAC 3561040 3.2099986 32.860825 45
GCTTA 3996970 3.1834536 138.20607 3
TCACT 3046835 3.155437 33.469322 45
GTTGA 5052745 3.0949383 100.08498 18
TAGTA 4024370 3.029389 127.63489 6
ATGTT 4069220 2.8636398 122.25663 16
ACTTG 3540095 2.8195674 34.15307 7
TTTGG 4912285 2.812925 71.69791 21
AGGTA 4248285 2.7834806 112.81601 3
AGTAG 4232295 2.7730038 110.89186 7
TAGTT 3882405 2.732172 103.28589 18
ATAGT 3509670 2.6419427 112.54314 17
GATGT 4308350 2.6389768 106.61158 15
TTGAC 3302140 2.6300442 80.83527 19
TTGTA 3591025 2.5271184 104.03035 13
GTATA 3318395 2.4979584 107.14334 15
TATAG 3311865 2.493043 106.82231 16
TGTAT 3514320 2.473139 101.43664 14
GGTAG 4615515 2.4607198 90.59582 4
TGACT 3072050 2.4467854 68.325066 20
CACTG 2692475 2.4270554 21.882818 45
AGATT 3014470 2.2691755 88.206924 10
GTAGA 3394700 2.2242107 77.38286 8
GAGGT 4159190 2.2174344 92.01887 2
TGAGG 4148430 2.2116978 88.097404 1
TAGAT 2931710 2.206877 88.118805 9
AGTTT 3082805 2.1694682 76.880486 19
ATTGT 3052230 2.1479516 82.62034 12
GTTTG 3696990 2.11701 68.84121 20
ACTGG 3009760 2.0864925 34.21863 22
GATTG 3390525 2.076785 72.558174 11
GACTT 2230550 1.7765586 29.890434 21
GTTGG 3343530 1.6664691 30.367556 21
CTGTT 2151290 1.6018306 45.776676 19
AGAAC 1663115 1.515618 45.36316 15
AGTTG 2447635 1.4992404 30.462322 9
TCCCG 1554865 1.4829658 35.08969 12
GATGG 2755875 1.4692698 37.648697 21
AGTGG 2683605 1.4307396 19.845789 6
AAGAA 1654345 1.4248958 43.05623 14
CACTT 1368575 1.4173568 43.80863 6
AACTG 1657720 1.4123057 41.57393 17
GCACT 1546085 1.3936746 38.921062 5
ACTGT 1738945 1.3850117 38.677467 18
CGTGG 2432100 1.3719361 12.221691 19
TGTGG 2674490 1.3330089 10.338254 20
AAGCT 1551935 1.3221815 42.697487 1
CCTGG 1782450 1.3074132 5.768713 17
GCCTG 1782315 1.3073143 26.688856 17
CTGAC 1415330 1.2758092 9.142494 45
AGCTG 1831000 1.2693264 34.341503 2
GCTGT 1918650 1.2434573 10.902269 17
CTGCC 1299865 1.2397574 47.42658 4
AGGCT 1765130 1.2236626 19.837652 18
GCTTG 1873080 1.2139239 21.453022 20
CATGG 1745495 1.2100507 9.54693 23
TCACA 1087070 1.2042538 44.976704 2
GGCTT 1855860 1.2027637 22.632488 19
AATCC 1076025 1.1920183 29.20035 8
CCTGT 1404805 1.183843 29.709595 18
TTGAT 1667030 1.173142 42.882755 19
CTGTG 1779430 1.1532302 10.542032 21
GCTAA 1348135 1.1485528 40.410347 10
TGCAC 1253105 1.129576 38.95879 4
CAGTT 1409315 1.1224724 39.575565 8
GCCAG 1425040 1.1180791 39.241688 6
TTGAA 1465620 1.1032615 37.824806 11
CCCCC 782515 1.0983343 20.178257 1
TTCAA 1117610 1.0939323 31.54177 1
CCGTG 1486230 1.0901381 14.578435 18
TTGCA 1297030 1.0330411 34.704914 3
GCTGG 1822665 1.0281568 8.733641 2
CCCGG 1232645 1.0232786 30.393513 13
ATTGC 1278995 1.0186769 34.759693 2
TGACC 1105730 0.996729 6.3494787 45
ACAGT 1168785 0.99575424 31.456873 4
CAGTG 1416195 0.9817661 25.795935 5
GGCCT 1311125 0.9616999 27.022161 16
CACAG 996275 0.9606323 36.243473 3
GTCCC 1003885 0.9574639 34.9304 11
CCGGC 1152430 0.9566882 30.356182 14
CGGCC 1147775 0.9528239 30.435886 15
GAAGA 1351140 0.9469452 34.90446 13
TGAAG 1444070 0.9461561 32.768696 12
CAGAA 1007915 0.9185259 26.081633 15
TGGCT 1414725 0.9168686 24.292826 8
TTCAC 881820 0.9132518 37.911163 1
GCTGC 1235280 0.9060683 36.26828 3
GTTCC 1068695 0.9005998 19.474203 15
TGCTG 1387955 0.89951926 9.636366 16
CTTGT 1197600 0.89172184 31.564823 8
TAGTG 1451135 0.8888581 9.27153 15
TTGTC 1190680 0.88656926 31.594557 9
GGACT 1276095 0.8846429 20.498407 4
TCTGA 1107855 0.8823696 5.3379617 18
CTGTA 1096325 0.87318635 10.895177 19
CTAAG 1010805 0.86116207 31.669596 11
GGCTA 1225905 0.84984905 25.499952 9
CAAGT 993500 0.84641904 27.522243 3
ATACC 751260 0.8322443 8.947726 19
TATTG 1172880 0.825393 25.956606 1
TAGGC 1184780 0.8213395 19.06501 17
GACCA 851705 0.8212344 5.8843307 45
CCCAA 654915 0.8211186 16.72549 10
CAGGA 1103425 0.8182344 23.99692 12
AATGG 1246145 0.81647545 5.665104 23
CCAGG 1039840 0.81585306 20.77514 11
TGTCC 964485 0.81278104 30.133009 10
AGGAT 1239130 0.8118792 21.215126 13
CACGT 898095 0.80956227 9.931897 23
AAGTA 998400 0.8039178 25.926134 4
GTAAT 1055965 0.79488933 24.42171 6
GGCTG 1408570 0.79456764 8.417631 1
GTAGG 1470470 0.78396773 18.66908 8
TTCCC 713200 0.7815062 6.806842 8
ACCAA 650710 0.7710774 6.338957 43
CCCGT 805350 0.7681095 6.0461326 10
TATGG 1247530 0.7641447 11.991913 22
TAAGT 1003785 0.7556102 27.881392 12
AGTTC 948060 0.7550982 27.916157 14
AAGTT 999080 0.7520685 27.230015 13
GTGCT 1158715 0.7509512 9.5939455 15
ACCAC 596080 0.7473525 8.755664 2
TCCGT 878750 0.74053127 16.524939 17
AGGTT 1208490 0.7402317 21.185137 10
CGTTC 864575 0.72858596 9.121059 25
CCACT 621435 0.72839457 12.727191 5
GACCT 803905 0.72465736 7.994881 5
ATCCA 652785 0.7231538 28.909546 9
TCCTT 744685 0.72099674 11.254297 11
TTCTG 958860 0.71395826 9.326737 16
CCCAC 536185 0.71128905 14.600623 4
TGGAC 1015060 0.7036824 20.238403 3
TTCCG 833090 0.7020531 17.271797 16
GTGGT 1405465 0.7005064 10.254884 15
AGTAA 866835 0.6979809 25.893335 5
TCAAG 815300 0.6946003 27.451195 2
AACAT 660700 0.69175833 15.424824 1
ATCCC 587785 0.68895286 19.721682 8
TAATC 695685 0.6809462 25.757542 7
GTGGC 1201400 0.6777041 22.55432 7
TAGGT 1106345 0.67766523 20.81326 9
TGTAG 1104630 0.6766147 8.28632 11
CCAAA 560620 0.6643227 13.871811 11
GAAGG 1162255 0.6628166 15.902885 17
GTTAT 940340 0.6617472 9.108536 20
ATAGG 996500 0.6529078 21.936682 16
CCCCA 489865 0.64984214 15.629194 3
GTCAG 929290 0.64422303 19.91141 13
TTTTG 977665 0.6432018 7.9547577 14
GGTTG 1262850 0.6294247 17.261229 11
CATTG 787370 0.62711394 5.6436877 6
GGATA 947030 0.620495 21.074259 14
CAAAG 677160 0.61710465 14.261696 1
TCGGT 948665 0.61481994 9.701383 15
CACTA 553590 0.6132659 6.878936 6
CAACG 635555 0.6128174 12.569252 7
ACGTT 768800 0.6123235 8.640419 24
GCCCA 599985 0.6121091 8.564337 11
CACCA 487560 0.6112924 8.028501 1
ACATT 621595 0.60842586 14.480599 2
ATTTG 857070 0.60314745 7.9948306 15
GATAG 920215 0.6029258 21.637068 15
AGAAG 857270 0.60081685 19.978268 16
CTCCT 548120 0.6006158 12.692483 10
ACTGC 662925 0.59757495 9.86535 7
TCTCA 576040 0.5965725 10.2902975 25
AGCAG 803630 0.59592426 8.9147415 16
AAAGA 691580 0.5956614 10.183213 2
GTTGT 1035010 0.59267855 15.873499 12
CTACT 562995 0.5830625 6.806503 8
CTGCT 690050 0.5815119 9.436987 8
ACATG 681015 0.5801953 10.736937 22
GAGTC 834375 0.5784239 20.006624 11
CTTCT 597260 0.57826126 6.3660316 1
AAGCA 632530 0.5764327 10.955935 15
ATCAC 520060 0.5761214 12.518694 21
CGCCT 601385 0.5735762 10.239064 29
AAAGC 623010 0.567757 10.800567 14
AGCTC 627970 0.5660657 5.178479 13
CCAAT 505495 0.5599863 5.9311337 44
AGAAT 694115 0.55890566 9.58464 4
AACGC 577710 0.5570419 13.19149 8
TTGTG 972675 0.55698353 8.712404 13
CCGGG 870985 0.5560624 5.6090446 2
CTCAG 612540 0.55215687 5.8047338 7
GAATC 643660 0.5483705 10.385467 6
CGACC 534995 0.5458058 6.5351696 3
TCCCA 457400 0.5361264 13.742067 9
AAGGC 722760 0.53595585 15.512166 18
TAAAT 573575 0.5306155 9.986468 12
ATCTC 507035 0.5251079 10.363196 24
TCGCC 550070 0.524634 10.565229 28
TCCGA 578935 0.5218646 14.543768 7
AAATT 562675 0.52053183 10.398685 13
CATTC 500400 0.5182364 15.545209 3
CTTTT 603380 0.5161681 10.022659 13
ATTCA 525495 0.51436186 14.443096 4
TCTCC 468725 0.5136168 12.919968 9
TGGAG 961240 0.5124764 15.548658 9
CTGTC 606680 0.5112552 12.779496 12
CCACG 499350 0.5094405 6.226117 3
TGACA 597370 0.5089334 10.501202 20
GGGCT 901595 0.5085855 6.570747 18
GCAGC 647515 0.5080369 9.192663 17
ACCCT 433355 0.5079428 7.8766637 21
ACTAG 594515 0.506501 7.4489837 1
GTCCG 687915 0.50458026 12.294585 6
GGAGT 945190 0.5039195 15.463169 10
GTTCG 768080 0.4977847 7.0148926 26
AGACC 514480 0.496074 8.79844 4
TCAGT 620255 0.49401242 7.0508733 12
TTTGA 701590 0.49373117 7.731908 16
AATTT 560120 0.48441866 9.635355 14
ACCGG 614275 0.48195696 6.136907 1
ACTAC 432920 0.47958788 6.964757 7
GTCGG 846850 0.47770405 8.619667 14
TACTG 598655 0.4768088 5.2091737 9
TTTGT 722250 0.47516537 12.266867 12
CGCTG 647455 0.47490323 9.744742 10
TGGTT 829025 0.47472516 7.8764167 16
CTGGT 730615 0.473504 10.141192 3
CTCAC 403675 0.4731544 7.446442 4
ACGGA 634920 0.47081894 9.711979 3
GTAAA 582670 0.46916947 8.874955 2
AAAAG 534355 0.4602427 10.382506 13
TGAGT 748345 0.45838085 7.4538174 19
CCTTT 470575 0.4556061 11.25651 12
CAAAA 403995 0.45245564 13.6089325 12
ACATC 408200 0.4522031 12.10604 6
TCAAC 406330 0.45013154 14.63674 6
CGGAA 605355 0.44889528 8.989601 4
GGTCC 610525 0.4478153 12.110624 5
GACAT 523635 0.44611436 10.524198 21
TGTAA 592355 0.44590178 8.384486 1
CCGAA 454880 0.4386062 11.175995 8
CTTGA 549970 0.43803278 5.276879 16
CTAAA 417495 0.43712065 11.242117 11
CGGTG 766035 0.4321167 8.5533 16
CAATC 390040 0.43208548 5.929934 45
TAGAA 529650 0.42647743 5.2009544 10
AGCAC 440615 0.42485157 6.2205606 5
TGGTC 652720 0.42302102 10.323203 4
AAACA 373865 0.41871145 12.310603 4
GAGTT 669335 0.40998518 6.6099396 19
CAGCT 454730 0.40990347 11.200349 18
GGTTA 666920 0.4085059 8.414824 17
TTTCC 420260 0.40689158 11.10814 2
CAGCA 420740 0.4056876 8.672823 4
AGAGC 546855 0.40551516 6.837155 11
CCCCG 375510 0.40534085 5.704129 10
AGTTA 538235 0.40516233 7.714856 20
GTTCT 537550 0.40025476 9.191412 15
GTGAG 749585 0.39963442 6.6320596 18
ACCTC 336480 0.39439398 8.099338 5
AGCCC 385200 0.39298382 8.943662 10
AAGGT 595270 0.3900215 6.9459743 11
TACCC 332580 0.38982272 8.046452 20
TCTGT 522700 0.38919756 5.7345757 17
CTAGA 456635 0.38903323 7.409929 2
TAAAC 369275 0.38663396 11.584064 3
ATCCT 373095 0.3863937 6.378578 8
CATCC 325540 0.381571 12.663911 7
AAATA 380370 0.37639675 7.0799365 12
CCTCA 319525 0.37452075 7.1620607 6
CCCAT 315370 0.36965054 6.232507 1
AGTGA 562600 0.36861607 6.9415293 16
TTATG 523505 0.3684071 9.103945 21
AACGG 495800 0.3676558 9.640934 2
CGGTC 499790 0.36659205 5.272444 15
ACGCT 406155 0.3661169 11.824282 9
TCCCC 293935 0.3645296 6.405907 9
CGACT 397260 0.3580988 6.2847357 13
CCGAC 349090 0.35614413 5.9574876 12
GGTGA 667765 0.35601285 6.955004 17
CTCAA 318140 0.3524348 9.496222 26
TGTTT 535095 0.35203686 7.3462234 19
CAGAT 412075 0.35107008 5.4634423 9
CCATA 316085 0.3501583 6.0373716 2
TGTCT 469185 0.3493508 5.310538 10
TGCTA 435065 0.34651476 8.492295 9
CTACA 307770 0.34094694 7.3878903 3
AGAGG 593055 0.33821037 6.672812 1
TGGGC 596485 0.3364744 6.884401 17
CCGTA 372060 0.33538294 10.724252 5
GATCA 393340 0.33510867 5.5155716 11
GATTT 471645 0.33191162 5.2043095 15
TAGAC 386165 0.32899588 7.4594736 3
TAATT 379400 0.32812333 5.5375075 7
GCTAC 359195 0.3237862 5.914156 2
TTCGC 384060 0.32365113 9.29789 27
CCCCT 258315 0.3203547 5.2376328 15
GAAGC 426945 0.31659704 5.5781345 19
CGAAG 424165 0.3145356 8.0210705 9
TATCT 339650 0.31080058 9.243439 23
GACTA 359760 0.30649993 5.4908104 19
TGTCG 467445 0.30294627 9.595613 13
GTTTC 402680 0.29983184 8.537954 1
GAGAG 517545 0.29514813 5.360379 10
TCAAT 300400 0.2940357 8.392277 27
CATAG 339800 0.28949487 9.407022 16
TGTGC 446480 0.28935906 9.371354 14
CGTAG 415540 0.28806987 8.453835 6
TTCAG 357040 0.28437045 5.820979 10
AGATC 333540 0.28416166 5.1899877 10
AGTGT 462950 0.28356898 7.181205 9
CTAGC 313955 0.28300583 7.4941053 8
TACAT 287390 0.28130135 6.205152 4
AAGAT 348290 0.28044525 6.77375 16
TTGGG 554425 0.27633432 6.1544766 16
TCACG 305875 0.27572235 9.9081745 22
TAGCC 300585 0.27095383 7.594735 9
CCCGA 263960 0.2692939 5.3869877 11
GTCTC 314855 0.26533142 5.834054 11
GTGTA 427700 0.2619774 7.53819 10
CTGCA 286460 0.25822124 5.7551093 11
GCTCC 270125 0.25763407 5.3053436 14
ACCTA 230675 0.2555413 9.145252 6
GATAC 295020 0.25134426 6.1067286 18
AGATA 307550 0.24764116 6.2894363 17
ATAAA 244775 0.24221817 5.2758036 4
TGCAT 299565 0.23859352 6.357341 14
AGCTA 274310 0.23370025 5.54317 1
CATAA 222470 0.2329279 5.524064 3
CCTAG 245630 0.22141622 7.4608536 7
GCATA 253900 0.21631181 6.729733 15
AATAT 228640 0.21151537 5.085624 13
TAGCA 237155 0.2020458 6.350144 1
GTTGC 249895 0.16195436 5.2301803 12